[SIB-courses] REMINDER: Gene expression made useful easily: tools and database of Bgee, 18 June 2021, Streamed

Valeria DiCola Valeria.Dicola at sib.swiss
Wed May 12 12:30:36 CEST 2021


Dear All,

To clarify, there are a few seats left for the SIB course:
Gene expression made useful easily: tools and database of Bgee<https://www.sib.swiss/training/course/2021-06-genex-bgee>

live-streamed on 18 June 2021.


This is a course on bioinformatics resources taught by the developers of the resources. Bgee is a curated database of gene expression in animals, including model species such as human, mouse or drosophila, and others such as livestock, primates, or fishes. Bgee integrates information from single-cell and bulk RNA-seq, microarrays, and in situ hybridization. These data are available through a web interface and an R package. Bgee also includes tools which use these data, such as TopAnat or Expression Comparison, and allows integration with users' own data through another R package. In this course, we will present the curated and pre-analysed gene expression data in Bgee. Hands-on will be open to make use of the Bgee companion tools, Bgee’s online functionalities, or Bgee R packages to retrieve data and integrate them into one’s own workflow (e.g. RNA-seq analysis R script).
There are two components to this course:

• the morning will consist of lectures and demonstrations, where the developers of the resources will present Bgee, its tools, and its curated and pre-analysed gene expression data.
• the afternoon will be dedicated to a hands-on session, where you will also make use of the Bgee companion tools: divided into parallel series Bgee web tools and Bgee R tools to retrieve data and integrate them into one’s own workflow (e.g. RNA-seq analysis R script).

Apply for the lectures only (free-of-charge, but registration is mandatory) here<https://www.sib.swiss/training/course/2021-06-genex-bgee-lec>
Apply for the lectures and practicals (fees apply, and registration is also mandatory) here<https://www.sib.swiss/training/course/2021-06-genex-bgee>



This course is addressed to life scientists who need to retrieve curated gene expression, obtain expression-based knowledge on genes of interest, or compare expression between genes and between species.

Should you have any questions, please don’t hesitate to contact us at training at sib.swiss<https://training@sib.swiss/>.

Best Regards,

Valeria


--
[signature_1206677472]
Valeria Di Cola, PhD
SIB Training
SIB | Swiss Institute of Bioinformatics
Quartier Sorge, Bâtiment Amphipôle
1015 Lausanne - Switzerland
valeria.dicola at sib.swiss - www.sib.swiss<http://www.sib.swiss/>


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