[sib-courses] New SIB course: "Analysis of RNA-seq data", 20-21 October 2015

Frédéric Schütz frederic.schutz at isb-sib.ch
Fri Sep 25 16:18:58 CEST 2015


There was a mistake in the previous email: the correct link is

  http://edu.isb-sib.ch/course/view.php?id=230

Sorry for the additional message !

Frédéric

On 25/09/15 15:55, Frédéric Schütz wrote:
> Dear all,
> 
> We are pleased to announce a new SIB course
> 
>   "Analysis of RNA-seq data"
>   (http://edu.isb-sib.ch/course/view.php?id=227)
> 
> which will take place in Lausanne on 20-21 October 2015.
> 
> 
> Overview:
> 
> This course will present all the bioinformatics tools required to
> analyze RNA-seq gene expression data, from the raw data to the
> biological interpretation.
> 
> We will discuss in particular the following topics:
> 
>  The Structure of an RNAseq analysis pipeline:
>     Raw data quality check
>     RNAseq reads alignment
>     Gene Expression level quantification by reads counting
>     De novo Transcripts reconstruction and differential splicing
>  Overview of downstream analysis
>     Differential Expression analysis with R/Bioconductor packages
>     Class discovery: Principal Component Analysis, Clustering,
>        Heatmaps, Gene Set Enrichment Analysis
> 
> 
> Prerequisites:
> Participants should already have a basic knowledge of Next Generation
> Sequencing (NGS) techniques (this course will discuss only the data
> analysis steps and not the data generation), as well as basic knowledge
> of the R statistical software (http://www.r-project.org/).
> 
> Participants should bring their laptop with the R and Virtualbox
> software installed.
> 
> 
> The attendance fee is 100 CHF (for members of the academic community)
> and includes course material and coffee breaks. Other participants
> should contact us before registering.
> 
> Registration is now open at
> http://www.isb-sib.ch/edu/Registration/SIB_courses_app.php?id=276
> 
> The list of forthcoming SIB courses is available on the web at
> http://www.isb-sib.ch/training/
> 
> For the organizers,
> 
> Frédéric Schütz
> 
> _______________________________________________
> SIB courses mailing list
> To unsubscribe, email courses-unsubscribe at lists.isb-sib.ch
> or visit http://lists.isb-sib.ch/mailman/listinfo/courses
> 


-- 
Frédéric Schütz, PhD
Maître d'Enseignement et de Recherche, Center for Integrative Genomics
Senior Statistician, Bioinformatics Core Facility (Delorenzi group)

Swiss Institute of Bioinformatics   /   University of Lausanne
Bâtiment Genopode, Quartier Sorge       +41 21 692 40 94
CH-1015 Lausanne                        +41 21 692 40 65 (fax)



More information about the courses mailing list