[sib-courses] New SIB course: "Analysis of RNA-seq data", 20-21 October 2015
frederic.schutz at isb-sib.ch
Fri Sep 25 16:18:58 CEST 2015
There was a mistake in the previous email: the correct link is
Sorry for the additional message !
On 25/09/15 15:55, Frédéric Schütz wrote:
> Dear all,
> We are pleased to announce a new SIB course
> "Analysis of RNA-seq data"
> which will take place in Lausanne on 20-21 October 2015.
> This course will present all the bioinformatics tools required to
> analyze RNA-seq gene expression data, from the raw data to the
> biological interpretation.
> We will discuss in particular the following topics:
> The Structure of an RNAseq analysis pipeline:
> Raw data quality check
> RNAseq reads alignment
> Gene Expression level quantification by reads counting
> De novo Transcripts reconstruction and differential splicing
> Overview of downstream analysis
> Differential Expression analysis with R/Bioconductor packages
> Class discovery: Principal Component Analysis, Clustering,
> Heatmaps, Gene Set Enrichment Analysis
> Participants should already have a basic knowledge of Next Generation
> Sequencing (NGS) techniques (this course will discuss only the data
> analysis steps and not the data generation), as well as basic knowledge
> of the R statistical software (http://www.r-project.org/).
> Participants should bring their laptop with the R and Virtualbox
> software installed.
> The attendance fee is 100 CHF (for members of the academic community)
> and includes course material and coffee breaks. Other participants
> should contact us before registering.
> Registration is now open at
> The list of forthcoming SIB courses is available on the web at
> For the organizers,
> Frédéric Schütz
> SIB courses mailing list
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Frédéric Schütz, PhD
Maître d'Enseignement et de Recherche, Center for Integrative Genomics
Senior Statistician, Bioinformatics Core Facility (Delorenzi group)
Swiss Institute of Bioinformatics / University of Lausanne
Bâtiment Genopode, Quartier Sorge +41 21 692 40 94
CH-1015 Lausanne +41 21 692 40 65 (fax)
More information about the courses