EMBnet News bulletin of 18-Dec-2003
Laurent Falquet
Laurent.Falquet at isb-sib.ch
Thu Dec 18 09:40:36 CET 2003
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* EMBnet News bulletin of 18-Dec-2003 *
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Dear Users,
UniProt is born!
----------------
The EMBL-European Bioinformatics Institute (EMBL-EBI),
the Swiss Institute of Bioinformatics (SIB) and Georgetown
University Medical Center's Protein Information Resource (PIR)
announce the launch of UniProt, a new universal protein resource
that will be the world's most comprehensive catalogue of information
on proteins. UniProt will provide a 'one-stop shop', allowing easy
access to all the publicly available information on proteins.
URL: http://www.uniprot.org
New local ENSEMBL mirror!
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The Swiss EMBnet node provides you with a mirror site
of the ENSEMBL database. This local site is currently
under development and is intended to offer an alternative
to the original EBI version. In the future we plan to add extra
information (e.g., other genomes or other useful annotations).
URL: http://ensembl.ch.embnet.org
New EMBL release 77 available on our servers
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RELEASE 77
The EMBL Nucleotide Sequence Database was frozen to make Release 77 on
26-NOV-2003. The release contains 30,351,263 sequence entries comprising
36,042,464,651 nucleotides. This represents an increase of about 6%
over Release 76.
A breakdown of Release 77 by division is shown below:
Division Entries Nucleotides
----------------- ------------ ---------------
Constructed 219 964,054,144
ESTs 19,154,248 9,840,795,402
Fungi 85,775 128,932,596
GSSs 7,741,817 4,565,763,269
HTC 148,702 198,490,642
HTG 68,154 11,648,470,209
Human 268,862 4,058,010,633
Invertebrates 137,976 628,186,612
Other Mammals 56,196 194,559,545
Mus musculus 84,906 1,551,700,924
Organelles 234,804 197,158,892
Patents 1,345,906 726,398,625
Bacteriophage 2,439 10,566,975
Plants 240,716 776,794,865
Prokaryotes 217,554 733,776,199
Rodents 26,629 73,113,920
STSs 257,995 120,474,694
Synthetic 9,353 17,390,062
Unclassified 1,910 2,199,994
Viruses 209,497 188,376,277
Other Vertebrates 57,605 381,304,316
------------ ---------------
Total 30,351,263 36,042,464,651
EMBL database statistics are available at
URL: http://www3.ebi.ac.uk/Services/DBStats/
Note: The nucleotide count for CON(structed) entries is included
in the table, but not in the total. The nucleotide count for the
segments of a CON entry is in the taxonomic divisions and is included
into the total from there.
EMBnet.news Vol.9 Issue 3 is available
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EMBnet.news is the official publication from the EMBnet organisation.
It provides users worldwide with information about the life of the nodes
and articles or tutorials describing some software packages.
We encourage you to read this publication.
All volumes archive:
http://www.embnet.org/download/embnetnews
or also here (only Vol.9):
ftp://ftp.ch.embnet.org/pub/embnetnews
How to contact us ?
-------------------
Don't forget our official help desk email address:
helpdesk at mail.ch.embnet.org
When sending an email to this address you will automatically receive
a ticket with a number. Your question will be answered by our team
or by an expert in the field from the Swiss Institute of Bioinformatics.
We wish you a Merry Christmas and a Happy New Year 2004.
Laurent Falquet, Swiss EMBnet node manager
and the Swiss EMBnet team members,
Lorenza Bordoli
Vassilios Ioannidis
--
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