EMBnet News bulletin of 27-Jun-2002
Laurent Falquet
Laurent.Falquet at isrec.unil.ch
Thu Jun 27 14:00:45 CEST 2002
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* EMBnet News bulletin of 27-Jun-2002 *
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Changes at EMBnet Switzerland
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Dear Users,
As of the beginning of June, I have been given the responsability of the
Swiss EMBnet node manager position by the Swiss Institute of Bioinformatics,
replacing Dr. Claude Bonnard.
Dr. Bonnard will continue to be a member of the EMBnet staff as the
technical manager.
The staff will be expanded (see article below) to include two course organisers
(one for the French part and one for the German part of Switzerland),
and a webmaster -
altogether there are three full-time positions (including mine).
One of the main change will be the discontinuation of the GCG service
by the end
of the year. As a replacement we will support the EMBOSS package. As
EMBOSS is similar
to GCG in its philosophy, current users of the GCG environment can
keep their files
and accounts on our servers. (see http://www.emboss.org)
We will organise an upgrade course for them to allow a smooth
transition to the new
package. Help pages and manuals will be available on our web site.
Opening of two positions at EMBnet Swiss
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The Swiss Institute of Bioinformatics seeks Two Bioinformatics
Support Specialists.
Detailed job descriptions are available at
http://www.ch.embnet.org/jobs/EMBjobs.html
Course registration is closed
-----------------------------
The registration for the 2nd edition of our "Introduction to
Bioinformatics" course
is closed. This course is scheduled for September 2-6, 2002.
http://www.ch.embnet.org/CoursEMBnet/Pages02/Introduction.html
EMBL 71 available (on ftp server already, soon on the blast server)
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The EMBL Nucleotide Sequence Database was frozen to make Release 71 on
28-MAY-2002. The release contains 17,226,421 sequence entries comprising
20,017,246,707 nucleotides. This represents an increase of about 11% over
Release 70. A breakdown of Release 71 by division is shown below:
Division Entries Nucleotides
----------------- ------------ ---------------
ESTs 11,763,049 5,613,609,700
Fungi 63,509 100,770,421
GSSs 3,550,771 1,984,550,807
HTC 33,011 40,813,331
HTG 52,659 6,626,890,390
Human 204,742 3,155,282,001
Invertebrates 94,035 553,561,424
Other Mammals 39,192 55,268,207
Mus musculus 56,513 333,366,348
Organelles 146,033 120,192,334
Patents 625,661 320,069,104
Bacteriophage 2,132 6,646,325
Plants 113,246 375,983,904
Prokaryotes 143,097 440,418,884
Rodents 22,176 34,483,433
STSs 118,038 47,210,513
Synthetic 6,653 12,617,074
Unclassified 1,259 2,029,845
Viruses 154,696 136,690,696
Other Vertebrates 35,946 56,791,966
------------ ---------------
Total 17,226,421 20,017,246,707
Best regards,
Laurent Falquet
Swiss EMBnet node Manager
--
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