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<p>Dear colleagues,</p>
<p>a gentle reminder to let you know that there a few places
available for the upcoming SIB course on "Inferring gene
regulatory networks from high-throughput data with ISMARA".</p>
<p>Kind regards,</p>
<p>Patricia<br>
</p>
<br>
<div class="moz-cite-prefix">On 09.04.18 15:37, Patricia Palagi
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:6c1734c8-e9aa-5e14-b95d-2619b93e37e4@sib.swiss">
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Dear colleagues,<br>
<p>We are pleased to announce the following SIB course: <br>
<br>
<b> "Inferring gene regulatory networks from high-throughput
data with ISMARA"</b><br>
<br>
This one-day course will be held in <b>Basel</b> <b>on 23 May
2018</b>. It is addressed to any researcher that aims to make
computational inferences about gene regulation from gene
expression and chromatin state data and would like to learn how
to use ISMARA, a web-based system, to explore predictions and to
generate new analyses of their own data. You will learn how to
use the ISMARA system, the kind of data it is able to analyze,
and how to explore in-depth all the analysis results that the
system provides, which include:</p>
<ul>
<li>key regulators, their activities, and the expression
profiles of these regulators</li>
<li>genes and pathways targeted by each regulator</li>
<li>core network of interactions between key regulators</li>
<li>main regulators of a particular gene and this gene's
expression is affected by each regulator</li>
<li>explore embedded links to the String and SwissRegulon
databases</li>
<li>how to average across replicate data and how to calculate
contrasts between particular samples</li>
<li>how to download comprehensive predictions and potential
post-processing of these results</li>
</ul>
<p>Further detailed information, prerequisites and application
form are available <a moz-do-not-send="true"
href="https://www.sib.swiss/training/course/2018-05-reg-networks">here</a>.<br>
<br>
Any questions? Don't hesitate to contact us at <a
class="moz-txt-link-abbreviated"
href="mailto:training@sib.swiss" moz-do-not-send="true">training@sib.swiss</a>.<br>
<br>
Best regards,<br>
Patricia, on behalf of the ISMARA team. <br>
</p>
<p>-- <br>
</p>
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font-size: 12px;" border="0">
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<tr>
<td><img style="margin-right:1em;"
src="https://www.sib.swiss/images/sib/SMU-GLU/SIB_logo_20_email-signature.png"
alt="SIB logo 20th anniversary" title="SIB logo 20th
anniversary" moz-do-not-send="true"><br>
</td>
<td><b>Patricia Palagi<br>
SIB Training<br>
</b> <b><span style="color:#f00;">SIB</span> | Swiss
Institute of Bioinformatics</b><br>
Quartier Sorge, Bâtiment Génopode - 1015 Lausanne -
Switzerland<br>
t +41 21 692 4078<br>
<a class="moz-txt-link-abbreviated"
href="mailto:patricia.palagi@sib.swiss"
moz-do-not-send="true">patricia.palagi@sib.swiss</a> - <a
class="moz-txt-link-abbreviated"
href="http://www.sib.swiss" moz-do-not-send="true">www.sib.swiss</a></td>
</tr>
</tbody>
</table>
<br>
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